Collaborative analysis of multi-gigapixel imaging data using Cytomine

Abstract

We developed Cytomine to foster active and distributed collaboration of multidisciplinary teams for large-scale image-based studies. It uses web development methodologies and machine learning in order to readily organize, explore, share and analyze (semantically and quantitatively) multi-gigapixel imaging data over the internet. We illustrate how it has been used in several biomedical applications.

Publication
Bioinformatics
Raphaël Marée
Raphaël Marée
Head of Cytomine ULiège R&D
Loic Rollus
Loic Rollus
Software developer (2010-2015)
Benjamin Stevens
Benjamin Stevens
Software developer (2010-2014)
Renaud Hoyoux
Renaud Hoyoux
Software developer (2014-2017, now at Cytomine cooperative)
Gilles Louppe
Gilles Louppe
Machine learning contributor (2013)
Rémy Vandaele
Rémy Vandaele
Machine learning researcher (2014-2019)